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RNA-seq of canine transmissible venereal tumour biopsies

ABSTRACT: To assess expression of mtDNA genes in the canine transmissible venereal tumour (CTVT), biopsy tissue samples from 33 CTVT cases were subjected to total RNA extraction, and stranded RNA sequencing libraries generated with the Ribo-Zero ribosomal RNA removal kit (insert size 100–300 bp) were sequenced using 75-bp paired-end sequencing reads on an Illumina HiSeq4000 instrument. Gene transcript abundance was quantified using the Salmon software (v0.8.2).

INSTRUMENT(S): Illumina HiSeq 4000

ORGANISM(S): Canis lupus familiaris

SUBMITTER: Adrian Baez-Ortega

PROVIDER: E-MTAB-9037 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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