Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of Ectocarpus siliculosus to hyposaline, hypersaline, and oxidative stress


ABSTRACT: Transcriptomic study for the response of Ectocarpus siliculosus to hyposaline, hypersaline, and oxidative stress (exposure 6h)

ORGANISM(S): Ectocarpus siliculosus

SUBMITTER: Simon Dittami 

PROVIDER: E-TABM-578 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress.

Dittami Simon M SM   Scornet Delphine D   Petit Jean-Louis JL   Ségurens Béatrice B   Da Silva Corinne C   Corre Erwan E   Dondrup Michael M   Glatting Karl-Heinz KH   König Rainer R   Sterck Lieven L   Rouzé Pierre P   Van de Peer Yves Y   Cock J Mark JM   Boyen Catherine C   Tonon Thierry T  

Genome biology 20090616 6


<h4>Background</h4>Brown algae (Phaeophyceae) are phylogenetically distant from red and green algae and an important component of the coastal ecosystem. They have developed unique mechanisms that allow them to inhabit the intertidal zone, an environment with high levels of abiotic stress. Ectocarpus siliculosus is being established as a genetic and genomic model for the brown algal lineage, but little is known about its response to abiotic stress.<h4>Results</h4>Here we examine the transcriptomi  ...[more]

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