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Amplicons, Metagenomes, and Metatranscriptomes from Sediment and Water.


ABSTRACT: High fecal indicator bacterium (FIB) counts in water have been found to correlate with high sediment FIB counts. To determine the other bacterial populations in common between the two substrates, sediment and water samples from suburban waters known to be impacted by stormwater runoff were examined using next-generation sequencing.

SUBMITTER: Newman MR 

PROVIDER: S-EPMC10112233 | biostudies-literature | 2023 Apr

REPOSITORIES: biostudies-literature

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Amplicons, Metagenomes, and Metatranscriptomes from Sediment and Water.

Newman Madison R MR   Sanchez Darlenys D   Acosta Anna M AM   Connors Bernadette J BJ  

Microbiology resource announcements 20230301 4


High fecal indicator bacterium (FIB) counts in water have been found to correlate with high sediment FIB counts. To determine the other bacterial populations in common between the two substrates, sediment and water samples from suburban waters known to be impacted by stormwater runoff were examined using next-generation sequencing. ...[more]

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