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MBECS: Microbiome Batch Effects Correction Suite.


ABSTRACT: Despite the availability of batch effect correcting algorithms (BECA), no comprehensive tool that combines batch correction and evaluation of the results exists for microbiome datasets. This work outlines the Microbiome Batch Effects Correction Suite development that integrates several BECAs and evaluation metrics into a software package for the statistical computation framework R.

SUBMITTER: Olbrich M 

PROVIDER: S-EPMC10155362 | biostudies-literature | 2023 May

REPOSITORIES: biostudies-literature

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MBECS: Microbiome Batch Effects Correction Suite.

Olbrich Michael M   Künstner Axel A   Busch Hauke H  

BMC bioinformatics 20230503 1


Despite the availability of batch effect correcting algorithms (BECA), no comprehensive tool that combines batch correction and evaluation of the results exists for microbiome datasets. This work outlines the Microbiome Batch Effects Correction Suite development that integrates several BECAs and evaluation metrics into a software package for the statistical computation framework R. ...[more]

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