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ABSTRACT:
SUBMITTER: Hellemann E
PROVIDER: S-EPMC10214482 | biostudies-literature | 2023 May
REPOSITORIES: biostudies-literature
Hellemann Erich E Durrant Jacob D JD
bioRxiv : the preprint server for biology 20230505
Structure-based virtual screening (VS) is an effective method for identifying potential small-molecule ligands, but traditional VS approaches consider only a single binding-pocket conformation. Consequently, they struggle to identify ligands that bind to alternate conformations. Ensemble docking helps address this issue by incorporating multiple conformations into the docking process, but it depends on methods that can thoroughly explore pocket flexibility. We here introduce Sub-Pocket EXplorer ...[more]