Genomic and ecological factors shaping specialism and generalism across an entire subphylum.
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ABSTRACT:
SUBMITTER: Opulente DA
PROVIDER: S-EPMC10327049 | biostudies-literature | 2023 Sep
REPOSITORIES: biostudies-literature
Publications
Genomic and ecological factors shaping specialism and generalism across an entire subphylum.
Opulente Dana A DA Leavitt LaBella Abigail A Harrison Marie-Claire MC Wolters John F JF Liu Chao C Li Yonglin Y Kominek Jacek J Steenwyk Jacob L JL Stoneman Hayley R HR VanDenAvond Jenna J Miller Caroline R CR Langdon Quinn K QK Silva Margarida M Gonçalves Carla C Ubbelohde Emily J EJ Li Yuanning Y Buh Kelly V KV Jarzyna Martin M Haase Max A B MAB Rosa Carlos A CA Čadež Neža N Libkind Diego D DeVirgilio Jeremy H JH Beth Hulfachor Amanda A Kurtzman Cletus P CP Sampaio José Paulo JP Gonçalves Paula P Zhou Xiaofan X Shen Xing-Xing XX Groenewald Marizeth M Rokas Antonis A Hittinger Chris Todd CT
bioRxiv : the preprint server for biology 20230908
Organisms exhibit extensive variation in ecological niche breadth, from very narrow (specialists) to very broad (generalists). Paradigms proposed to explain this variation either invoke trade-offs between performance efficiency and breadth or underlying intrinsic or extrinsic factors. We assembled genomic (1,154 yeast strains from 1,049 species), metabolic (quantitative measures of growth of 843 species in 24 conditions), and ecological (environmental ontology of 1,088 species) data from nearly ...[more]
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