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Sonogenetic control of multiplexed genome regulation and base editing.


ABSTRACT: Manipulating gene expression in the host genome with high precision is crucial for controlling cellular function and behavior. Here, we present a precise, non-invasive, and tunable strategy for controlling the expression of multiple endogenous genes both in vitro and in vivo, utilizing ultrasound as the stimulus. By engineering a hyper-efficient dCas12a and effector under a heat shock promoter, we demonstrate a system that can be inducibly activated through thermal energy produced by ultrasound absorption. This system allows versatile thermal induction of gene activation or base editing across cell types, including primary T cells, and enables multiplexed gene activation using a single guide RNA array. In mouse models, localized temperature elevation guided by high-intensity focused ultrasound effectively triggers reporter gene expression in implanted cells. Our work underscores the potential of ultrasound as a clinically viable approach to enhance cell and gene-based therapies via precision genome and epigenome engineering.

SUBMITTER: Liu P 

PROVIDER: S-EPMC10584809 | biostudies-literature | 2023 Oct

REPOSITORIES: biostudies-literature

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Sonogenetic control of multiplexed genome regulation and base editing.

Liu Pei P   Foiret Josquin J   Situ Yinglin Y   Zhang Nisi N   Kare Aris J AJ   Wu Bo B   Raie Marina N MN   Ferrara Katherine W KW   Qi Lei S LS  

Nature communications 20231018 1


Manipulating gene expression in the host genome with high precision is crucial for controlling cellular function and behavior. Here, we present a precise, non-invasive, and tunable strategy for controlling the expression of multiple endogenous genes both in vitro and in vivo, utilizing ultrasound as the stimulus. By engineering a hyper-efficient dCas12a and effector under a heat shock promoter, we demonstrate a system that can be inducibly activated through thermal energy produced by ultrasound  ...[more]

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