Unknown

Dataset Information

0

Expanding the genetics and phenotypes of ocular congenital cranial dysinnervation disorders.


ABSTRACT:

Purpose

To identify genetic etiologies and genotype/phenotype associations for unsolved ocular congenital cranial dysinnervation disorders (oCCDDs).

Methods

We coupled phenotyping with exome or genome sequencing of 467 pedigrees with genetically unsolved oCCDDs, integrating analyses of pedigrees, human and animal model phenotypes, and de novo variants to identify rare candidate single nucleotide variants, insertion/deletions, and structural variants disrupting protein-coding regions. Prioritized variants were classified for pathogenicity and evaluated for genotype/phenotype correlations.

Results

Analyses elucidated phenotypic subgroups, identified pathogenic/likely pathogenic variant(s) in 43/467 probands (9.2%), and prioritized variants of uncertain significance in 70/467 additional probands (15.0%). These included known and novel variants in established oCCDD genes, genes associated with syndromes that sometimes include oCCDDs (e.g., MYH10, KIF21B, TGFBR2, TUBB6), genes that fit the syndromic component of the phenotype but had no prior oCCDD association (e.g., CDK13, TGFB2), genes with no reported association with oCCDDs or the syndromic phenotypes (e.g., TUBA4A, KIF5C, CTNNA1, KLB, FGF21), and genes associated with oCCDD phenocopies that had resulted in misdiagnoses.

Conclusion

This study suggests that unsolved oCCDDs are clinically and genetically heterogeneous disorders often overlapping other Mendelian conditions and nominates many candidates for future replication and functional studies.

SUBMITTER: Jurgens JA 

PROVIDER: S-EPMC10996726 | biostudies-literature | 2024 Mar

REPOSITORIES: biostudies-literature

altmetric image

Publications

Expanding the genetics and phenotypes of ocular congenital cranial dysinnervation disorders.

Jurgens Julie A JA   Barry Brenda J BJ   Chan Wai-Man WM   MacKinnon Sarah S   Whitman Mary C MC   Matos Ruiz Paola M PM   Pratt Brandon M BM   England Eleina M EM   Pais Lynn L   Lemire Gabrielle G   Groopman Emily E   Glaze Carmen C   Russell Kathryn A KA   Singer-Berk Moriel M   Di Gioia Silvio Alessandro SA   Lee Arthur S AS   Andrews Caroline C   Shaaban Sherin S   Wirth Megan M MM   Bekele Sarah S   Toffoloni Melissa M   Bradford Victoria R VR   Foster Emma E EE   Berube Lindsay L   Rivera-Quiles Cristina C   Mensching Fiona M FM   Sanchis-Juan Alba A   Fu Jack M JM   Wong Isaac I   Zhao Xuefang X   Wilson Michael W MW   Weisburd Ben B   Lek Monkol M   Brand Harrison H   Talkowski Michael E ME   MacArthur Daniel G DG   O'Donnell-Luria Anne A   Robson Caroline D CD   Hunter David G DG   Engle Elizabeth C EC  

medRxiv : the preprint server for health sciences 20240326


<h4>Purpose</h4>To identify genetic etiologies and genotype/phenotype associations for unsolved ocular congenital cranial dysinnervation disorders (oCCDDs).<h4>Methods</h4>We coupled phenotyping with exome or genome sequencing of 467 pedigrees with genetically unsolved oCCDDs, integrating analyses of pedigrees, human and animal model phenotypes, and <i>de novo</i> variants to identify rare candidate single nucleotide variants, insertion/deletions, and structural variants disrupting protein-codin  ...[more]

Similar Datasets

| S-EPMC3524829 | biostudies-literature
| S-EPMC3194333 | biostudies-other
| S-EPMC5469921 | biostudies-literature
| S-EPMC9733177 | biostudies-literature
| S-EPMC7574091 | biostudies-literature
| S-EPMC5644584 | biostudies-literature
| S-EPMC4289688 | biostudies-literature
| S-EPMC3599919 | biostudies-literature
| PRJNA353734 | ENA
| S-EPMC2787189 | biostudies-literature