Dataset Information

IRIME: Mitigating exploitation-exploration imbalance in RIME optimization for feature selection.

ABSTRACT: Rime optimization algorithm (RIME) encounters issues such as an imbalance between exploitation and exploration, susceptibility to local optima, and low convergence accuracy when handling problems. This paper introduces a variant of RIME called IRIME to address these drawbacks. IRIME integrates the soft besiege (SB) and composite mutation strategy (CMS) and restart strategy (RS). To comprehensively validate IRIME's performance, IEEE CEC 2017 benchmark tests were conducted, comparing it against many advanced algorithms. The results indicate that the performance of IRIME is the best. In addition, applying IRIME in four engineering problems reflects the performance of IRIME in solving practical problems. Finally, the paper proposes a binary version, bIRIME, that can be applied to feature selection problems. bIRIMR performs well on 12 low-dimensional datasets and 24 high-dimensional datasets. It outperforms other advanced algorithms in terms of the number of feature subsets and classification accuracy. In conclusion, bIRIME has great potential in feature selection.

SUBMITTER: Huang J

PROVIDER: S-EPMC11334803 | biostudies-literature | 2024 Aug

REPOSITORIES: biostudies-literature

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IRIME: Mitigating exploitation-exploration imbalance in RIME optimization for feature selection.

Huang Jinpeng J Chen Yi Y Heidari Ali Asghar AA Liu Lei L Chen Huiling H Liang Guoxi G

iScience 20240722 8

Rime optimization algorithm (RIME) encounters issues such as an imbalance between exploitation and exploration, susceptibility to local optima, and low convergence accuracy when handling problems. This paper introduces a variant of RIME called IRIME to address these drawbacks. IRIME integrates the soft besiege (SB) and composite mutation strategy (CMS) and restart strategy (RS). To comprehensively validate IRIME's performance, IEEE CEC 2017 benchmark tests were conducted, comparing it against ma ...[more]

PMID: 39165845

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Project description:BackgroundExisting feature selection methods typically do not consider prior knowledge in the form of structural relationships among features. In this study, the features are structured based on prior knowledge into groups. The problem addressed in this article is how to select one representative feature from each group such that the selected features are jointly discriminating the classes. The problem is formulated as a binary constrained optimization and the combinatorial optimization is relaxed as a convex-concave problem, which is then transformed into a sequence of convex optimization problems so that the problem can be solved by any standard optimization algorithm. Moreover, a block coordinate gradient descent optimization algorithm is proposed for high dimensional feature selection, which in our experiments was four times faster than using a standard optimization algorithm.ResultsIn order to test the effectiveness of the proposed formulation, we used microarray analysis as a case study, where genes with similar expressions or similar molecular functions were grouped together. In particular, the proposed block coordinate gradient descent feature selection method is evaluated on five benchmark microarray gene expression datasets and evidence is provided that the proposed method gives more accurate results than the state-of-the-art gene selection methods. Out of 25 experiments, the proposed method achieved the highest average AUC in 13 experiments while the other methods achieved higher average AUC in no more than 6 experiments.ConclusionA method is developed to select a feature from each group. When the features are grouped based on similarity in gene expression, we showed that the proposed algorithm is more accurate than state-of-the-art gene selection methods that are particularly developed to select highly discriminative and less redundant genes. In addition, the proposed method can exploit any grouping structure among features, while alternative methods are restricted to using similarity based grouping.

Dataset Information

IRIME: Mitigating exploitation-exploration imbalance in RIME optimization for feature selection.

Publications

IRIME: Mitigating exploitation-exploration imbalance in RIME optimization for feature selection.

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