Haplotype structure and phenotypic associations in the chromosomal regions surrounding two Arabidopsis thaliana flowering time loci.
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ABSTRACT:
SUBMITTER: Hagenblad J
PROVIDER: S-EPMC1448803 | biostudies-literature | 2004 Nov
REPOSITORIES: biostudies-literature
Publications
Haplotype structure and phenotypic associations in the chromosomal regions surrounding two Arabidopsis thaliana flowering time loci.
Hagenblad Jenny J Tang Chunlao C Molitor John J Werner Jonathan J Zhao Keyan K Zheng Honggang H Marjoram Paul P Weigel Detlef D Nordborg Magnus M
Genetics 20041101 3
The feasibility of using linkage disequilbrium (LD) to fine-map loci underlying natural variation in Arabidopsis thaliana was investigated by looking for associations between flowering time and marker polymorphism in the genomic regions containing two candidate genes, FRI and FLC, both of which are known to contribute to natural variation in flowering. A sample of 196 accessions was used, and polymorphism was assessed by sequencing a total of 17 roughly 500-bp fragments. Using a novel Bayesian a ...[more]
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