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MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data.


ABSTRACT: MAPPFinder is a tool that creates a global gene-expression profile across all areas of biology by integrating the annotations of the Gene Ontology (GO) Project with the free software package GenMAPP http://www.GenMAPP.org. The results are displayed in a searchable browser, allowing the user to rapidly identify GO terms with over-represented numbers of gene-expression changes. Clicking on GO terms generates GenMAPP graphical files where gene relationships can be explored, annotated, and files can be freely exchanged.

SUBMITTER: Doniger SW 

PROVIDER: S-EPMC151291 | biostudies-literature | 2003

REPOSITORIES: biostudies-literature

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MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data.

Doniger Scott W SW   Salomonis Nathan N   Dahlquist Kam D KD   Vranizan Karen K   Lawlor Steven C SC   Conklin Bruce R BR  

Genome biology 20030106 1


MAPPFinder is a tool that creates a global gene-expression profile across all areas of biology by integrating the annotations of the Gene Ontology (GO) Project with the free software package GenMAPP http://www.GenMAPP.org. The results are displayed in a searchable browser, allowing the user to rapidly identify GO terms with over-represented numbers of gene-expression changes. Clicking on GO terms generates GenMAPP graphical files where gene relationships can be explored, annotated, and files can  ...[more]

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