Unknown

Dataset Information

0

Novel IL10 gene family associations with systemic juvenile idiopathic arthritis.


ABSTRACT: Juvenile idiopathic arthritis (JIA) is the most common cause of chronic childhood disability and encompasses a number of disease subgroups. In this study we have focused on systemic JIA (sJIA), which accounts for approximately 11% of UK JIA cases. This study reports the investigation of three members of the IL10 gene family as candidate susceptibility loci in children with sJIA. DNA from 473 unaffected controls and 172 patients with sJIA was genotyped for a single nucleotide polymorphism (SNP) in IL19 and IL20 and two SNPs in IL10. We examined evidence for association of the four SNPs by single marker and haplotype analysis. Significant differences in allele frequency were observed between cases and controls, for both IL10-1082 (p = 0.031) and IL20-468 (p = 0.028). Furthermore, examination of the haplotypes of IL10-1082 and IL20-468 revealed greater evidence for association (global p = 0.0006). This study demonstrates a significant increased prevalence of the low expressing IL10-1082 genotype in patients with sJIA. In addition, we show a separate association with an IL20 polymorphism, and the IL10-1082A/IL20-468T haplotype. The two marker 'A-T' haplotype confers an odds ratio of 2.24 for sJIA. This positive association suggests an important role for these cytokines in sJIA pathogenesis.

SUBMITTER: Fife MS 

PROVIDER: S-EPMC1779449 | biostudies-literature | 2006

REPOSITORIES: biostudies-literature

altmetric image

Publications

Novel IL10 gene family associations with systemic juvenile idiopathic arthritis.

Fife Mark S MS   Gutierrez Ana A   Ogilvie Emma M EM   Stock Carmel J W CJ   Samuel Jane M JM   Thomson Wendy W   Mack Lisa F LF   Lewis Cathryn M CM   Woo Patricia P  

Arthritis research & therapy 20060101 5


Juvenile idiopathic arthritis (JIA) is the most common cause of chronic childhood disability and encompasses a number of disease subgroups. In this study we have focused on systemic JIA (sJIA), which accounts for approximately 11% of UK JIA cases. This study reports the investigation of three members of the IL10 gene family as candidate susceptibility loci in children with sJIA. DNA from 473 unaffected controls and 172 patients with sJIA was genotyped for a single nucleotide polymorphism (SNP) i  ...[more]

Similar Datasets

2018-11-15 | GSE122552 | GEO
2009-12-31 | GSE17590 | GEO
| S-EPMC4753112 | biostudies-literature
| S-EPMC3288602 | biostudies-literature
2015-09-03 | E-GEOD-57183 | biostudies-arrayexpress
2015-09-03 | GSE57183 | GEO
| S-EPMC5530341 | biostudies-literature
| PRJNA505535 | ENA
| S-EPMC2902595 | biostudies-other
| S-EPMC5482342 | biostudies-other