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Phylogenetic analysis of feline immunodeficiency virus in feral and companion domestic cats of New Zealand.


ABSTRACT: Nested PCR was used to amplify envelope V3-V6 gene fragments of feline immunodeficiency virus (FIV) from New Zealand cats. Phylogenetic analyses established that subtypes A and C predominate among New Zealand cats, with clear evidence of intersubtype recombination. In addition, 17 sequences were identified that were distinct from all known FIV clades, and we tentatively suggest these belong to a novel subtype.

SUBMITTER: Hayward JJ 

PROVIDER: S-EPMC1866009 | biostudies-literature | 2007 Mar

REPOSITORIES: biostudies-literature

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Phylogenetic analysis of feline immunodeficiency virus in feral and companion domestic cats of New Zealand.

Hayward Jessica J JJ   Taylor John J   Rodrigo Allen G AG  

Journal of virology 20061227 6


Nested PCR was used to amplify envelope V3-V6 gene fragments of feline immunodeficiency virus (FIV) from New Zealand cats. Phylogenetic analyses established that subtypes A and C predominate among New Zealand cats, with clear evidence of intersubtype recombination. In addition, 17 sequences were identified that were distinct from all known FIV clades, and we tentatively suggest these belong to a novel subtype. ...[more]

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