ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling.
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ABSTRACT:
SUBMITTER: Conde L
PROVIDER: S-EPMC1933149 | biostudies-literature | 2007 Jul
REPOSITORIES: biostudies-literature
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ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling.
Conde Lucía L Montaner David D Burguet-Castell Jordi J Tárraga Joaquín J Medina Ignacio I Al-Shahrour Fátima F Dopazo Joaquín J
Nucleic acids research 20070427 Web Server issue
We present the ISACGH, a web-based system that allows for the combination of genomic data with gene expression values and provides different options for functional profiling of the regions found. Several visualization options offer a convenient representation of the results. Different efficient methods for accurate estimation of genomic copy number from array-CGH hybridization data have been included in the program. Moreover, the connection to the gene expression analysis package GEPAS allows th ...[more]
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