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Graphs in molecular biology.


ABSTRACT: Graph theoretical concepts are useful for the description and analysis of interactions and relationships in biological systems. We give a brief introduction into some of the concepts and their areas of application in molecular biology. We discuss software that is available through the Bioconductor project and present a simple example application to the integration of a protein-protein interaction and a co-expression network.

SUBMITTER: Huber W 

PROVIDER: S-EPMC1995545 | biostudies-literature | 2007 Sep

REPOSITORIES: biostudies-literature

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Graphs in molecular biology.

Huber Wolfgang W   Carey Vincent J VJ   Long Li L   Falcon Seth S   Gentleman Robert R  

BMC bioinformatics 20070927


Graph theoretical concepts are useful for the description and analysis of interactions and relationships in biological systems. We give a brief introduction into some of the concepts and their areas of application in molecular biology. We discuss software that is available through the Bioconductor project and present a simple example application to the integration of a protein-protein interaction and a co-expression network. ...[more]

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