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Caenorhabditis elegans mutant allele identification by whole-genome sequencing.


ABSTRACT: Identification of the molecular lesion in Caenorhabditis elegans mutants isolated through forward genetic screens usually involves time-consuming genetic mapping. We used Illumina deep sequencing technology to sequence a complete, mutant C. elegans genome and thus pinpointed a single-nucleotide mutation in the genome that affects a neuronal cell fate decision. This constitutes a proof-of-principle for using whole-genome sequencing to analyze C. elegans mutants.

SUBMITTER: Sarin S 

PROVIDER: S-EPMC2574580 | biostudies-literature | 2008 Oct

REPOSITORIES: biostudies-literature

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Caenorhabditis elegans mutant allele identification by whole-genome sequencing.

Sarin Sumeet S   Prabhu Snehit S   O'Meara M Maggie MM   Pe'er Itsik I   Hobert Oliver O  

Nature methods 20080801 10


Identification of the molecular lesion in Caenorhabditis elegans mutants isolated through forward genetic screens usually involves time-consuming genetic mapping. We used Illumina deep sequencing technology to sequence a complete, mutant C. elegans genome and thus pinpointed a single-nucleotide mutation in the genome that affects a neuronal cell fate decision. This constitutes a proof-of-principle for using whole-genome sequencing to analyze C. elegans mutants. ...[more]

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