Protein identification pipeline for the homology-driven proteomics.
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ABSTRACT:
SUBMITTER: Junqueira M
PROVIDER: S-EPMC2644553 | biostudies-literature | 2008 Aug
REPOSITORIES: biostudies-literature
Publications
Protein identification pipeline for the homology-driven proteomics.
Junqueira Magno M Spirin Victor V Balbuena Tiago Santana TS Thomas Henrik H Adzhubei Ivan I Sunyaev Shamil S Shevchenko Andrej A
Journal of proteomics 20080712 3
Homology-driven proteomics is a major tool to characterize proteomes of organisms with unsequenced genomes. This paper addresses practical aspects of automated homology-driven protein identifications by LC-MS/MS on a hybrid LTQ Orbitrap mass spectrometer. All essential software elements supporting the presented pipeline are either hosted at the publicly accessible web server, or are available for free download. ...[more]
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