Ontology highlight
ABSTRACT:
SUBMITTER: Samson AO
PROVIDER: S-EPMC2686524 | biostudies-literature | 2009 Jan
REPOSITORIES: biostudies-literature
Samson Abraham O AO Levitt Michael M
Nucleic acids research 20081030 Database issue
Finding related conformations in the Protein Data Bank (PDB) is essential in many areas of bioscience. To assist this task, we designed a search engine that uses a compact database to quickly identify protein segments obeying a set of primary, secondary and tertiary structure constraints. The database contains information such as amino acid sequence, secondary structure, disulfide bonds, hydrogen bonds and atoms in contact as calculated from all protein structures in the PDB. The search engine p ...[more]