Ontology highlight
ABSTRACT:
SUBMITTER: Ensign DL
PROVIDER: S-EPMC2718323 | biostudies-literature | 2009 Apr
REPOSITORIES: biostudies-literature
Ensign Daniel L DL Pande Vijay S VS
Biophysical journal 20090401 8
We describe molecular dynamics simulations resulting in the folding the Fip35 Hpin1 WW domain. The simulations were run on a distributed set of graphics processors, which are capable of providing up to two orders of magnitude faster computation than conventional processors. Using the Folding@home distributed computing system, we generated thousands of independent trajectories in an implicit solvent model, totaling over 2.73 ms of simulations. A small number of these trajectories folded; the fold ...[more]