Identification of gene-gene interaction using principal components.
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ABSTRACT:
SUBMITTER: Li J
PROVIDER: S-EPMC2795980 | biostudies-literature | 2009 Dec
REPOSITORIES: biostudies-literature
Publications
Identification of gene-gene interaction using principal components.
Li Jia J Tang Rui R Biernacka Joanna M JM de Andrade Mariza M
BMC proceedings 20091215
After more than 200 genome-wide association studies, there have been some successful identifications of a single novel locus. Thus, the identification of single-nucleotide polymorphisms (SNP) with interaction effects is of interest. Using the Genetic Analysis Workshop 16 data from the North American Rheumatoid Arthritis Consortium, we propose an approach to screen for SNP-SNP interaction using a two-stage method and an approach for detecting gene-gene interactions using principal components. We ...[more]
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