Unknown

Dataset Information

0

Decreased replication origin activity in temporal transition regions.


ABSTRACT: In the mammalian genome, early- and late-replicating domains are often separated by temporal transition regions (TTRs) with novel properties and unknown functions. We identified a TTR in the mouse immunoglobulin heavy chain (Igh) locus, which contains replication origins that are silent in embryonic stem cells but activated during B cell development. To investigate which factors contribute to origin activation during B cell development, we systematically modified the genetic and epigenetic status of the endogenous Igh TTR and used a single-molecule approach to analyze DNA replication. Introduction of a transcription unit into the Igh TTR, activation of gene transcription, and enhancement of local histone modifications characteristic of active chromatin did not lead to origin activation. Moreover, very few replication initiation events were observed when two ectopic replication origin sequences were inserted into the TTR. These findings indicate that the Igh TTR represents a repressive compartment that inhibits replication initiation, thus maintaining the boundaries between early and late replication domains.

SUBMITTER: Guan Z 

PROVIDER: S-EPMC2806585 | biostudies-literature | 2009 Nov

REPOSITORIES: biostudies-literature

altmetric image

Publications

Decreased replication origin activity in temporal transition regions.

Guan Zeqiang Z   Hughes Christina M CM   Kosiyatrakul Settapong S   Norio Paolo P   Sen Ranjan R   Fiering Steven S   Allis C David CD   Bouhassira Eric E EE   Schildkraut Carl L CL  

The Journal of cell biology 20091101 5


In the mammalian genome, early- and late-replicating domains are often separated by temporal transition regions (TTRs) with novel properties and unknown functions. We identified a TTR in the mouse immunoglobulin heavy chain (Igh) locus, which contains replication origins that are silent in embryonic stem cells but activated during B cell development. To investigate which factors contribute to origin activation during B cell development, we systematically modified the genetic and epigenetic statu  ...[more]

Similar Datasets

| S-EPMC6646384 | biostudies-literature
| S-EPMC5319796 | biostudies-literature
| S-EPMC6314782 | biostudies-literature
2012-06-19 | E-GEOD-36045 | biostudies-arrayexpress
2010-05-22 | E-GEOD-15082 | biostudies-arrayexpress
2017-01-22 | GSE86651 | GEO
| S-EPMC3460190 | biostudies-literature
| S-EPMC2933864 | biostudies-other
| S-EPMC2779084 | biostudies-literature
2012-06-19 | GSE36045 | GEO