Ontology highlight
ABSTRACT:
SUBMITTER: Faust K
PROVIDER: S-EPMC2859126 | biostudies-literature | 2010 May
REPOSITORIES: biostudies-literature
Faust Karoline K Dupont Pierre P Callut Jérôme J van Helden Jacques J
Bioinformatics (Oxford, England) 20100312 9
<h4>Motivation</h4>Subgraph extraction is a powerful technique to predict pathways from biological networks and a set of query items (e.g. genes, proteins, compounds, etc.). It can be applied to a variety of different data types, such as gene expression, protein levels, operons or phylogenetic profiles. In this article, we investigate different approaches to extract relevant pathways from metabolic networks. Although these approaches have been adapted to metabolic networks, they are generic enou ...[more]