Ontology highlight
ABSTRACT:
SUBMITTER: Li G
PROVIDER: S-EPMC2872882 | biostudies-literature | 2010
REPOSITORIES: biostudies-literature
Li Guoliang G Fullwood Melissa J MJ Xu Han H Mulawadi Fabianus Hendriyan FH Velkov Stoyan S Vega Vinsensius V Ariyaratne Pramila Nuwantha PN Mohamed Yusoff Bin YB Ooi Hong-Sain HS Tennakoon Chandana C Wei Chia-Lin CL Ruan Yijun Y Sung Wing-Kin WK
Genome biology 20100225 2
Chromatin interaction analysis with paired-end tag sequencing (ChIA-PET) is a new technology to study genome-wide long-range chromatin interactions bound by protein factors. Here we present ChIA-PET Tool, a software package for automatic processing of ChIA-PET sequence data, including linker filtering, mapping tags to reference genomes, identifying protein binding sites and chromatin interactions, and displaying the results on a graphical genome browser. ChIA-PET Tool is fast, accurate, comprehe ...[more]