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ABSTRACT: Background
Genetic admixture is a common caveat for genetic association analysis. Therefore, it is important to characterize the genetic structure of the population under study to control for this kind of potential bias.Results
In this study we have sampled over 800 unrelated individuals from the population of Spain, and have genotyped them with a genome-wide coverage. We have carried out linkage disequilibrium, haplotype, population structure and copy-number variation (CNV) analyses, and have compared these estimates of the Spanish population with existing data from similar efforts.Conclusions
In general, the Spanish population is similar to the Western and Northern Europeans, but has a more diverse haplotypic structure. Moreover, the Spanish population is also largely homogeneous within itself, although patterns of micro-structure may be able to predict locations of origin from distant regions. Finally, we also present the first characterization of a CNV map of the Spanish population. These results and original data are made available to the scientific community.
SUBMITTER: Gayan J
PROVIDER: S-EPMC2887418 | biostudies-literature | 2010 May
REPOSITORIES: biostudies-literature
Gayán Javier J Galan José J JJ González-Pérez Antonio A Sáez María Eugenia ME Martínez-Larrad María Teresa MT Zabena Carina C Rivero M Carmen MC Salinas Ana A Ramírez-Lorca Reposo R Morón Francisco J FJ Royo Jose Luis JL Moreno-Rey Concha C Velasco Juan J Carrasco José M JM Molero Eva E Ochoa Carolina C Ochoa María Dolores MD Gutiérrez Marta M Reina Mercedes M Pascual Rocío R Romo-Astorga Alejandro A Susillo-González Juan Luis JL Vázquez Enrique E Real Luis M LM Ruiz Agustín A Serrano-Ríos Manuel M
BMC genomics 20100525
<h4>Background</h4>Genetic admixture is a common caveat for genetic association analysis. Therefore, it is important to characterize the genetic structure of the population under study to control for this kind of potential bias.<h4>Results</h4>In this study we have sampled over 800 unrelated individuals from the population of Spain, and have genotyped them with a genome-wide coverage. We have carried out linkage disequilibrium, haplotype, population structure and copy-number variation (CNV) anal ...[more]