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Building chromosome-wide LD maps.

ABSTRACT: BMapBuilder builds maps of pairwise linkage disequilibrium (LD) in either two or three dimensions. The optimized resolution allows for graphical display of LD for single nucleotide polymorphisms (SNPs) in a whole chromosome.The program is coded in Java, which runs on all relevant operating systems, including Windows, Mac and Unix/Linux, and is available from http://bios.ugr.es/BMapBuilder.

SUBMITTER: Abad-Grau MM

PROVIDER: S-EPMC2893229 | biostudies-literature | 2006 Aug

REPOSITORIES: biostudies-literature

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Building chromosome-wide LD maps.

Abad-Grau María M MM Montes Rosana R Sebastiani Paola P

Bioinformatics (Oxford, England) 20060616 16

<h4>Summary</h4>BMapBuilder builds maps of pairwise linkage disequilibrium (LD) in either two or three dimensions. The optimized resolution allows for graphical display of LD for single nucleotide polymorphisms (SNPs) in a whole chromosome.<h4>Availability</h4>The program is coded in Java, which runs on all relevant operating systems, including Windows, Mac and Unix/Linux, and is available from http://bios.ugr.es/BMapBuilder. ...[more]

PMID: 16782726

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