Browse
Submit Data
Databases
API
Help

Dataset Information

67 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Poly[piperazinediium [aqua-bis(?-pyridine-2,5-dicarboxyl-ato)zincate] dihydrate].

ABSTRACT: The polymeric title compound, {(C(4)H(12)N(2))[Zn(C(7)H(3)NO(4))(2)(H(2)O)]·2H(2)O}(n), was obtained by the reaction of zinc(II) nitrate hexa-hydrate with the proton-transfer compound (pipzH(2))(py-2,5-dc) (where pipz is piperazine and py-2,5-dcH(2) is pyridine-2,5-dicarboxylic acid) in aqueous solution. Each Zn(II) atom is coordinated in a distorted octa-hedral geometry by four O atoms and two N atoms from one water mol-ecule and two (py-2,5-dc)(2-) ligands, which also act as bridging ligands between Zn(II) atoms. ?-? Stacking inter-actions between two aromatic rings of (py-2,5-dc)(2-) fragments, with centroid-centroid distances of 3.4747?(7) and 3.7081?(7)?Å are observed. The crystal structure is stabilized by O-H?O and N-H?O hydrogen bonds.

SUBMITTER: Aghabozorg H

PROVIDER: S-EPMC2915064 | biostudies-literature | 2007 Dec

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Poly[piperazinediium [aqua-bis(μ-pyridine-2,5-dicarboxyl-ato)zincate] dihydrate].

Aghabozorg Hossein H Derikvand Zohreh Z Nemati Andya A Bahrami Zohreh Z Attar Gharamaleki Jafar J

Acta crystallographica. Section E, Structure reports online 20071206 Pt 1

The polymeric title compound, {(C(4)H(12)N(2))[Zn(C(7)H(3)NO(4))(2)(H(2)O)]·2H(2)O}(n), was obtained by the reaction of zinc(II) nitrate hexa-hydrate with the proton-transfer compound (pipzH(2))(py-2,5-dc) (where pipz is piperazine and py-2,5-dcH(2) is pyridine-2,5-dicarboxylic acid) in aqueous solution. Each Zn(II) atom is coordinated in a distorted octa-hedral geometry by four O atoms and two N atoms from one water mol-ecule and two (py-2,5-dc)(2-) ligands, which also act as bridging ligands b ...[more]

PMID: 21200471

Similar Datasets

catena-Poly[[[diaqua-iron(II)]-μ-pyridine-2,5-dicarboxyl-ato-[tetra-aqua-iron(II)]-μ-pyridine-2,5-dicarboxyl-ato] tetra-hydrate].

Project description:In the crystal structure of the title compound, {[Fe(2)(C(7)H(3)NO(4))(2)(H(2)O)(6)]·4H(2)O}(n), there are two types of coordination for the Fe(II) atoms. One Fe(II) atom is in a distorted octa-hedral N(2)O(4) environment, with two chelating rings from the pyridine-dicarboxyl-ate ligands and two O atoms from the water mol-ecules, while the other is in a distorted octa-hedral O(6) environment with two O atoms from the pyridine-dicarboxyl-ate ligands and four O atoms from the water mol-ecules. Both Fe(II) atoms lie on crystallographic centers of symmetry. The complex possesses an infinite chain structure running along the [101] direction. These chains are inter-connected by the uncoordinated water mol-ecules through O-H⋯O hydrogen bonds.

| S-EPMC2960407 | biostudies-literature

Poly[[tetra-aqua-bis-(μ(3)-pyridine-2,6-dicarboxyl-ato)(μ(2)-pyridine-2,6-dicarboxyl-ato)dilanthanum(III)] dihydrate].

Project description:There are two independent La(III) cations in the polymeric title compound, {[La(2)(C(7)H(3)NO(4))(3)(H(2)O)(4)]·2H(2)O}(n). One is nine-coordinated in an LaN(2)O(7) tricapped trigonal-prismatic geometry formed by three pyridine-2,6-dicarboxyl-ate anions and two water mol-ecules, while the other is ten-coordinated in an LaNO(9) bicapped square-anti-prismatic geometry formed by four pyridine-2,6-dicarboxyl-ate anions and two water mol-ecules. The two La(III) cations are separated by a non-bonding distance of 5.026 (3) Å. The pyridine-2,6-dicarboxyl-ate anions bridge the La(III) cations, forming a three-dimensional polymeric complex. The crystal structure contains extensive classical O-H⋯O hydrogen bonds and weak inter-molecular C-H⋯O hydrogen bonds. The crystal structure is further consolidated by π-π stacking between pyridine rings, the shortest centroid-centroid distance between parallel pyridine rings being 3.700 (5) Å.

| S-EPMC3200968 | biostudies-literature

Poly[piperazinediium [[aqua-bismuth-ate(III)]-di-μ-pyridine-2,6-dicarboxyl-ato-bis-muthate(III)-di-μ-pyridine-2,6-dicarboxyl-ato] monohydrate].

Project description:The title compound, {(C(4)H(12)N(2))[Bi(2)(C(7)H(3)NO(4))(4)(H(2)O)]·H(2)O}(n) or {(pipzH(2))[Bi(2)(pydc)(4)(H(2)O)]·H(2)O}(n), where pydcH(2) is pyridine-2,6-dicarboxylic acid and pipz is piperazine, was obtained by reaction of Bi(NO(3))(3)·5H(2)O with (pipzH(2))(pydc-H)(2)·3H(2)O in a 1:2 molar ratio in aqueous solution. There are two independent Bi(III) atoms in the structure, one of which is eight-coordinate with a distorted bicapped trigonal-prismatic geometry, and another which is nine-coordinate with a distorted tricapped trigonal-prismatic geometry. The carboxyl-ate groups of the (pydc)(2-) ligands link dinuclear [Bi(2)(C(7)H(3)NO(4))(4)(H(2)O)](2-) units into one-dimensional coordin-ation polymers. The pipzH(2) (2+) cations (site symmetry ) and non-coordinated water mol-ecules lie between these polymers, forming N-H⋯O and O-H⋯O hydrogen bonds to the O atoms of the carboxylate groups.

| S-EPMC2960170 | biostudies-literature

Poly[aqua-(dimethyl sulfoxide)(μ(4)-pyridine-2,5-dicarboxyl-ato)calcium(II)].

Project description:In the polymeric title compound, [Ca(C(7)H(3)NO(4))(H(2)O)(C(2)H(6)OS)](n), the Ca(II) ion is coordinated in a distorted penta-gonal-bipyramidal CdNO(6) geometry. The crystal packing is stabilized by O-H⋯O hydrogen bonds and π-π stacking inter-actions between the aromatic rings of pyridine-2,5-dicarb-oxy-late with centroid-centroid distances of 3.6166 (13) Å.

| S-EPMC3051525 | biostudies-literature

Poly[μ(2)-aqua-aqua-μ(4)-pyridine-2,4-dicarboxyl-ato-strontium].

Project description:In the title polymeric complex, [Sr(C(7)H(3)NO(4))(H(2)O)(2)](n), the Sr(II) atom is eight-coordinated by four O atoms and one N atom of four pyridine-2,4-dicarboxyl-ate (py-2,4-dc) ligands and three O atoms of three coordinated water mol-ecules in a dodeca-hedral geometry. These units are connected via the carboxyl-ate O atoms and water mol-ecules, building polymeric layers parallel to (100). In the crystal structure, non-covalent inter-actions consisting of O-H⋯O hydrogen bonds and π-π stacking inter-actions [centroid-centroid distances = 3.862 (17) and 3.749 (17) Å] connect the various components, forming a three-dimensional structure.

| S-EPMC2977487 | biostudies-literature

Poly[tetra-aqua-bis-(μ(4)-thio-phene-2,5-dicarboxyl-ato)(μ(2)-thio-phene-2,5-dicarboxyl-ato)dieuropium(III)].

Project description:The three-dimensional coordination polymer, [Eu(2)(C(6)H(2)O(4)S)(3)(H(2)O)(4)](n), has been synthesized under hydro-thermal conditions. The asymmetric unit comprises one Eu(3+) cation, two aqua ligands and one and a half thiophene-2,5-dicarboxylate anions (the half-anion being completed by a twofold rotation axis). The Eu(3+) cation is eight-coordinated in a distorted dodeca-hedral geometry. The crystal structure features O-H⋯O hydrogen bonds.

| S-EPMC3414099 | biostudies-literature

Poly[tetra-aqua-μ(3)-pyridine-3,5-dicarboxyl-ato-strontium(II)].

Project description:The reaction of strontium(II) nitrate with the proton-transfer compound (pdaH(2))(py-3,5-dc)·H(2)O (where pda = propane-1,3-diamine and py-3,5-dcH(2) = pyridine-3,5-dicarboxylic acid) leads to the formation of the title polymeric compound, [Sr(C(7)H(3)NO(4))(H(2)O)(4)](n). The propane-1,3-diaminium cation is not incorporated in this crystal structure. The Sr(II) atom lies on an inversion centre and is eight-coordinated by four O atoms from three py-3,5-dc ligands and four O atoms from four coordinated water mol-ecules. The coordination polyhedron of the Sr(II) atom is a distorted dodeca-hedron. These binuclear units are connected via the carboxyl-ate O atoms to build a one-dimensional polymeric chain. In the crystal structure, non-covalant inter-actions consisting of hydrogen bonds (X-H⋯O, with X = O and C) and π-π stacking inter-actions [3.4604 (19) Å] connect the various components to form a supra-molecular structure.

| S-EPMC2960463 | biostudies-literature

catena-Poly[diimidazolium [bis-(?-pyridine-2,5-dicarboxyl-ato)bis-[diaqua-praseodymate(III)]]-bis-(?-pyridine-2,5-dicarboxyl-ato)].

Project description:The title compound {(C(3)H(5)N(2))(2)[Pr(2)(C(7)H(3)NO(4))(4)(H(2)O)(4)]}(n), has a chain structure featuring a dimeric unit consisting of two Pr(III) atoms within a dodecahedral environment. Each of the metal cations is coordinated by two N atoms and two O atoms from two pyridine-2,5-dicarboxyl-ate ligands, two O atoms from another two pyridine-2,5-dicarboxyl-ate ligands and two water O atoms. The Pr(III) ions are bridged by two ligands along the c axis, forming the dimeric unit, and these are connected by four ligands along the b axis, forming a chain. N-H?O and O-H?O hydrogen bonds are found in the structure.

| S-EPMC3089278 | biostudies-literature

catena-Poly[[[aqua-(1,10-phenanthroline-κN,N')cadmium(II)]-μ-pyridine-2,3-dicarboxyl-ato-κN,O:O,O] dihydrate].

Project description:The title complex, {[Cd(C(7)H(3)NO(4))(C(12)H(8)N(2))(H(2)O)]·2H(2)O}(n), is a one-dimensional coordination polymer, wherein the Cd atom is seven-coordinated by two 1,10-phenanthroline N atoms, one N and three O atoms from two different pyridine-2,3-dicarboxyl-ate ligands, and one water mol-ecule. It is further extended to a two-dimensional layer structure by hydrogen bonds and π-π stacking inter-actions [centroid-centroid distances of 3.560 (2) and 3.666 (2) Å]. There is a C4 water chain in the structure whose repeat unit contains four water mol-ecules with O⋯O distances in the range 2.748 (3)-2.795 (4) Å. One of the two H atoms of each water of hydration is statistically distributed over two positions with equal occupancy.

| S-EPMC2959933 | biostudies-literature

Bis(μ-pyridine-2,5-dicarboxyl-ato)-κN,O:O;κO:N,O-bis-[aqua-(2,2'-bipyridine-κN,N')cobalt(II)] dihydrate.

Project description:In the centrosymmetric title compound, [Co(2)(C(7)H(3)NO(4))(2)(C(10)H(8)N(2))(2)(H(2)O)(2)]·2H(2)O, the two Co(II) cations are bridged by pairs of pyridine-2,5-dicarboxyl-ate anions across an inversion center. Besides two pyridine-2,5-dicarboxyl-ate anions, one bidentate 2,2'-bipyridine and one water mol-ecule coordinate to the Co cation, completing a distorted octa-hedral coordination geometry. Within the dinuclear mol-ecule, π-π stacking occurs between parallel pyridine rings with centroid-centroid distances of 3.802 (2) Å. The crystal structure contains extensive O-H⋯O and weak C-H⋯O hydrogen bonds and C-H⋯π inter-actions.

| S-EPMC3051640 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data