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Complete genome sequence of Haliangium ochraceum type strain (SMP-2).


ABSTRACT: Haliangium ochraceum Fudou et al. 2002 is the type species of the genus Haliangium in the myxococcal family 'Haliangiaceae'. Members of the genus Haliangium are the first halophilic myxobacterial taxa described. The cells of the species follow a multicellular lifestyle in highly organized biofilms, called swarms, they decompose bacterial and yeast cells as most myxobacteria do. The fruiting bodies contain particularly small coccoid myxospores. H. ochraceum encodes the first actin homologue identified in a bacterial genome. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the myxococcal suborder Nannocystineae, and the 9,446,314 bp long single replicon genome with its 6,898 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

SUBMITTER: Ivanova N 

PROVIDER: S-EPMC3035250 | biostudies-literature | 2010 Jan

REPOSITORIES: biostudies-literature

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Complete genome sequence of Haliangium ochraceum type strain (SMP-2).

Ivanova Natalia N   Daum Chris C   Lang Elke E   Abt Birte B   Kopitz Markus M   Saunders Elizabeth E   Lapidus Alla A   Lucas Susan S   Glavina Del Rio Tijana T   Nolan Matt M   Tice Hope H   Copeland Alex A   Cheng Jan-Fang JF   Chen Feng F   Bruce David D   Goodwin Lynne L   Pitluck Sam S   Mavromatis Konstantinos K   Pati Amrita A   Mikhailova Natalia N   Chen Amy A   Palaniappan Krishna K   Land Miriam M   Hauser Loren L   Chang Yun-Juan YJ   Jeffries Cynthia D CD   Detter John C JC   Brettin Thomas T   Rohde Manfred M   Göker Markus M   Bristow Jim J   Markowitz Victor V   Eisen Jonathan A JA   Hugenholtz Philip P   Kyrpides Nikos C NC   Klenk Hans-Peter HP  

Standards in genomic sciences 20100128 1


Haliangium ochraceum Fudou et al. 2002 is the type species of the genus Haliangium in the myxococcal family 'Haliangiaceae'. Members of the genus Haliangium are the first halophilic myxobacterial taxa described. The cells of the species follow a multicellular lifestyle in highly organized biofilms, called swarms, they decompose bacterial and yeast cells as most myxobacteria do. The fruiting bodies contain particularly small coccoid myxospores. H. ochraceum encodes the first actin homologue ident  ...[more]

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