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Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034).


ABSTRACT: Chitinophaga pinensis Sangkhobol and Skerman 1981 is the type strain of the species which is the type species of the rapidly growing genus Chitinophaga in the sphingobacterial family 'Chitinophagaceae'. Members of the genus Chitinophaga vary in shape between filaments and spherical bodies without the production of a fruiting body, produce myxospores, and are of special interest for their ability to degrade chitin. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the family 'Chitinophagaceae', and the 9,127,347 bp long single replicon genome with its 7,397 protein-coding and 95 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

SUBMITTER: Glavina Del Rio T 

PROVIDER: S-EPMC3035255 | biostudies-literature | 2010 Feb

REPOSITORIES: biostudies-literature

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Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034).

Glavina Del Rio Tijana T   Abt Birte B   Spring Stefan S   Lapidus Alla A   Nolan Matt M   Tice Hope H   Copeland Alex A   Cheng Jan-Fang JF   Chen Feng F   Bruce David D   Goodwin Lynne L   Pitluck Sam S   Ivanova Natalia N   Mavromatis Konstantinos K   Mikhailova Natalia N   Pati Amrita A   Chen Amy A   Palaniappan Krishna K   Land Miriam M   Hauser Loren L   Chang Yun-Juan YJ   Jeffries Cynthia D CD   Chain Patrick P   Saunders Elizabeth E   Detter John C JC   Brettin Thomas T   Rohde Manfred M   Göker Markus M   Bristow Jim J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Kyrpides Nikos C NC   Klenk Hans-Peter HP   Lucas Susan S  

Standards in genomic sciences 20100228 1


Chitinophaga pinensis Sangkhobol and Skerman 1981 is the type strain of the species which is the type species of the rapidly growing genus Chitinophaga in the sphingobacterial family 'Chitinophagaceae'. Members of the genus Chitinophaga vary in shape between filaments and spherical bodies without the production of a fruiting body, produce myxospores, and are of special interest for their ability to degrade chitin. Here we describe the features of this organism, together with the complete genome  ...[more]

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