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Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24).

ABSTRACT: Coraliomargarita akajimensis Yoon et al. 2007 is the type species of the genus Coraliomargarita. C. akajimensis is an obligately aerobic, Gram-negative, non-spore-forming, non-motile, spherical bacterium that was isolated from seawater surrounding the hard coral Galaxea fascicularis. C. akajimensis is of special interest because of its phylogenetic position in a genomically under-studied area of the bacterial diversity. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the family Puniceicoccaceae. The 3,750,771 bp long genome with its 3,137 protein-coding and 55 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

SUBMITTER: Mavromatis K 

PROVIDER: S-EPMC3035286 | biostudies-literature | 2010 Jun

REPOSITORIES: biostudies-literature

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Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24).

Mavromatis Konstantinos K   Abt Birte B   Brambilla Evelyne E   Lapidus Alla A   Copeland Alex A   Deshpande Shweta S   Nolan Matt M   Lucas Susan S   Tice Hope H   Cheng Jan-Fang JF   Han Cliff C   Detter John C JC   Woyke Tanja T   Goodwin Lynne L   Pitluck Sam S   Held Brittany B   Brettin Thomas T   Tapia Roxanne R   Ivanova Natalia N   Mikhailova Natalia N   Pati Amrita A   Liolios Konstantinos K   Chen Amy A   Palaniappan Krishna K   Land Miriam M   Hauser Loren L   Chang Yun-Juan YJ   Jeffries Cynthia D CD   Rohde Manfred M   Göker Markus M   Bristow James J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Klenk Hans-Peter HP   Kyrpides Nikos C NC  

Standards in genomic sciences 20100615 3

Coraliomargarita akajimensis Yoon et al. 2007 is the type species of the genus Coraliomargarita. C. akajimensis is an obligately aerobic, Gram-negative, non-spore-forming, non-motile, spherical bacterium that was isolated from seawater surrounding the hard coral Galaxea fascicularis. C. akajimensis is of special interest because of its phylogenetic position in a genomically under-studied area of the bacterial diversity. Here we describe the features of this organism, together with the complete g  ...[more]

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