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Complete genome sequence of Aminobacterium colombiense type strain (ALA-1).


ABSTRACT: Aminobacterium colombiense Baena et al. 1999 is the type species of the genus Aminobacterium. This genus is of large interest because of its isolated phylogenetic location in the family Synergistaceae, its strictly anaerobic lifestyle, and its ability to grow by fermentation of a limited range of amino acids but not carbohydrates. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the second completed genome sequence of a member of the family Synergistaceae and the first genome sequence of a member of the genus Aminobacterium. The 1,980,592 bp long genome with its 1,914 protein-coding and 56 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

SUBMITTER: Chertkov O 

PROVIDER: S-EPMC3035294 | biostudies-literature | 2010 Jun

REPOSITORIES: biostudies-literature

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Complete genome sequence of Aminobacterium colombiense type strain (ALA-1).

Chertkov Olga O   Sikorski Johannes J   Brambilla Evelyne E   Lapidus Alla A   Copeland Alex A   Glavina Del Rio Tijana T   Nolan Matt M   Lucas Susan S   Tice Hope H   Cheng Jan-Fang JF   Han Cliff C   Detter John C JC   Bruce David D   Tapia Roxanne R   Goodwin Lynne L   Pitluck Sam S   Liolios Konstantinos K   Ivanova Natalia N   Mavromatis Konstantinos K   Ovchinnikova Galina G   Pati Amrita A   Chen Amy A   Palaniappan Krishna K   Land Miriam M   Hauser Loren L   Chang Yun-Juan YJ   Jeffries Cynthia D CD   Spring Stefan S   Rohde Manfred M   Göker Markus M   Bristow James J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Kyrpides Nikos C NC   Klenk Hans-Peter HP  

Standards in genomic sciences 20100615 3


Aminobacterium colombiense Baena et al. 1999 is the type species of the genus Aminobacterium. This genus is of large interest because of its isolated phylogenetic location in the family Synergistaceae, its strictly anaerobic lifestyle, and its ability to grow by fermentation of a limited range of amino acids but not carbohydrates. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the second completed genome sequence of a member of  ...[more]

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