Dataset Information

Seroconverting blood donors as a resource for characterising and optimising recent infection testing algorithms for incidence estimation.

ABSTRACT:

Introduction

Biomarker-based cross-sectional incidence estimation requires a Recent Infection Testing Algorithm (RITA) with an adequately large mean recency duration, to achieve reasonable survey counts, and a low false-recent rate, to minimise exposure to further bias and imprecision. Estimating these characteristics requires specimens from individuals with well-known seroconversion dates or confirmed long-standing infection. Specimens with well-known seroconversion dates are typically rare and precious, presenting a bottleneck in the development of RITAs.

Methods

The mean recency duration and a 'false-recent rate' are estimated from data on seroconverting blood donors. Within an idealised model for the dynamics of false-recent results, blood donor specimens were used to characterise RITAs by a new method that maximises the likelihood of cohort-level recency classifications, rather than modelling individual sojourn times in recency.

Results

For a range of assumptions about the false-recent results (0% to 20% of biomarker response curves failing to reach the threshold distinguishing test-recent and test-non-recent infection), the mean recency duration of the Vironostika-LS ranged from 154 (95% CI: 96-231) to 274 (95% CI: 234-313) days in the South African donor population (n?=?282), and from 145 (95% CI: 67-226) to 252 (95% CI: 194-308) days in the American donor population (n?=?106). The significance of gender and clade on performance was rejected (p-value?=?10%), and utility in incidence estimation appeared comparable to that of a BED-like RITA. Assessment of the Vitros-LS (n?=?108) suggested potentially high false-recent rates.

Discussion

The new method facilitates RITA characterisation using widely available specimens that were previously overlooked, at the cost of possible artefacts. While accuracy and precision are insufficient to provide estimates suitable for incidence surveillance, a low-cost approach for preliminary assessments of new RITAs has been demonstrated. The Vironostika-LS and Vitros-LS warrant further analysis to provide greater precision of estimates.

SUBMITTER: Kassanjee R

PROVIDER: S-EPMC3111407 | biostudies-literature | 2011

REPOSITORIES: biostudies-literature

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Publications

Seroconverting blood donors as a resource for characterising and optimising recent infection testing algorithms for incidence estimation.

Kassanjee Reshma R Welte Alex A McWalter Thomas A TA Keating Sheila M SM Vermeulen Marion M Stramer Susan L SL Busch Michael P MP

PloS one 20110609 6

<h4>Introduction</h4>Biomarker-based cross-sectional incidence estimation requires a Recent Infection Testing Algorithm (RITA) with an adequately large mean recency duration, to achieve reasonable survey counts, and a low false-recent rate, to minimise exposure to further bias and imprecision. Estimating these characteristics requires specimens from individuals with well-known seroconversion dates or confirmed long-standing infection. Specimens with well-known seroconversion dates are typically ...[more]

PMID: 21694760

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Dataset Information

Seroconverting blood donors as a resource for characterising and optimising recent infection testing algorithms for incidence estimation.

Introduction

Methods

Results

Discussion

Publications

Seroconverting blood donors as a resource for characterising and optimising recent infection testing algorithms for incidence estimation.

Similar Datasets

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