SEAS: a system for SEED-based pathway enrichment analysis.
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ABSTRACT:
SUBMITTER: Mao X
PROVIDER: S-EPMC3142180 | biostudies-literature | 2011
REPOSITORIES: biostudies-literature
Publications
SEAS: a system for SEED-based pathway enrichment analysis.
Mao Xizeng X Zhang Yu Y Xu Ying Y
PloS one 20110722 7
Pathway enrichment analysis represents a key technique for analyzing high-throughput omic data, and it can help to link individual genes or proteins found to be differentially expressed under specific conditions to well-understood biological pathways. We present here a computational tool, SEAS, for pathway enrichment analysis over a given set of genes in a specified organism against the pathways (or subsystems) in the SEED database, a popular pathway database for bacteria. SEAS maps a given set ...[more]
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