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De novo sequencing and assembly of the whole genome of Novosphingobium sp. strain PP1Y.


ABSTRACT: Novosphingobium sp. strain PP1Y is a marine bacterium specifically adapted to use fuels as an energy source. We sequenced and assembled its entire genome using the Roche 454 genome sequencer system, which led to the identification of two plasmids and one megaplasmid, besides a 3.9-Mb circular chromosome.

SUBMITTER: D'Argenio V 

PROVIDER: S-EPMC3147705 | biostudies-literature | 2011 Aug

REPOSITORIES: biostudies-literature

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De novo sequencing and assembly of the whole genome of Novosphingobium sp. strain PP1Y.

D'Argenio V V   Petrillo M M   Cantiello P P   Naso B B   Cozzuto L L   Notomista E E   Paolella G G   Di Donato A A   Salvatore F F  

Journal of bacteriology 20110617 16


Novosphingobium sp. strain PP1Y is a marine bacterium specifically adapted to use fuels as an energy source. We sequenced and assembled its entire genome using the Roche 454 genome sequencer system, which led to the identification of two plasmids and one megaplasmid, besides a 3.9-Mb circular chromosome. ...[more]

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