Phylogenomics-based reconstruction of protozoan species tree.
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ABSTRACT:
SUBMITTER: Ocana KA
PROVIDER: S-EPMC3153122 | biostudies-literature | 2011
REPOSITORIES: biostudies-literature
Publications
Phylogenomics-based reconstruction of protozoan species tree.
Ocaña Kary A C S KA Dávila Alberto M R AM
Evolutionary bioinformatics online 20110731
We have developed a semi-automatic methodology to reconstruct the phylogenetic species tree in Protozoa, integrating different phylogenetic algorithms and programs, and demonstrating the utility of a supermatrix approach to construct phylogenomics-based trees using 31 universal orthologs (UO). The species tree obtained was formed by three major clades that were related to three groups of data: i) Species containing at least 80% of UO (25/31) in the concatenated multiple alignment or supermatrix, ...[more]
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