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Constructing a fish metabolic network model.


ABSTRACT: We report the construction of a genome-wide fish metabolic network model, MetaFishNet, and its application to analyzing high throughput gene expression data. This model is a stepping stone to broader applications of fish systems biology, for example by guiding study design through comparison with human metabolism and the integration of multiple data types. MetaFishNet resources, including a pathway enrichment analysis tool, are accessible at http://metafishnet.appspot.com.

SUBMITTER: Li S 

PROVIDER: S-EPMC3156954 | biostudies-literature | 2010

REPOSITORIES: biostudies-literature

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Constructing a fish metabolic network model.

Li Shuzhao S   Pozhitkov Alexander A   Ryan Rachel A RA   Manning Charles S CS   Brown-Peterson Nancy N   Brouwer Marius M  

Genome biology 20101129 11


We report the construction of a genome-wide fish metabolic network model, MetaFishNet, and its application to analyzing high throughput gene expression data. This model is a stepping stone to broader applications of fish systems biology, for example by guiding study design through comparison with human metabolism and the integration of multiple data types. MetaFishNet resources, including a pathway enrichment analysis tool, are accessible at http://metafishnet.appspot.com. ...[more]

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