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Characterization of the Na?/H? antiporter from Yersinia pestis.


ABSTRACT: Yersinia pestis, the bacterium that historically accounts for the Black Death epidemics, has nowadays gained new attention as a possible biological warfare agent. In this study, its Na?/H? antiporter is investigated for the first time, by a combination of experimental and computational methodologies. We determined the protein's substrate specificity and pH dependence by fluorescence measurements in everted membrane vesicles. Subsequently, we constructed a model of the protein's structure and validated the model using molecular dynamics simulations. Taken together, better understanding of the Yersinia pestis Na?/H? antiporter's structure-function relationship may assist in studies on ion transport, mechanism of action and designing specific blockers of Na?/H? antiporter to help in fighting Yersinia pestis -associated infections. We hope that our model will prove useful both from mechanistic and pharmaceutical perspectives.

SUBMITTER: Ganoth A 

PROVIDER: S-EPMC3216949 | biostudies-literature | 2011

REPOSITORIES: biostudies-literature

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Characterization of the Na⁺/H⁺ antiporter from Yersinia pestis.

Ganoth Assaf A   Alhadeff Raphael R   Kohen Dovrat D   Arkin Isaiah T IT  

PloS one 20111115 11


Yersinia pestis, the bacterium that historically accounts for the Black Death epidemics, has nowadays gained new attention as a possible biological warfare agent. In this study, its Na⁺/H⁺ antiporter is investigated for the first time, by a combination of experimental and computational methodologies. We determined the protein's substrate specificity and pH dependence by fluorescence measurements in everted membrane vesicles. Subsequently, we constructed a model of the protein's structure and val  ...[more]

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