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Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113).

ABSTRACT: Pedobacter saltans Steyn et al. 1998 is one of currently 32 species in the genus Pedobacter within the family Sphingobacteriaceae. The species is of interest for its isolated location in the tree of life. Like other members of the genus P. saltans is heparinolytic. Cells of P. saltans show a peculiar gliding, dancing motility and can be distinguished from other Pedobacter strains by their ability to utilize glycerol and the inability to assimilate D-cellobiose. The genome presented here is only the second completed genome sequence of a type strain from a member of the family Sphingobacteriaceae to be published. The 4,635,236 bp long genome with its 3,854 protein-coding and 67 RNA genes consists of one chromosome, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

SUBMITTER: Liolios K 

PROVIDER: S-EPMC3236043 | biostudies-literature | 2011 Oct

REPOSITORIES: biostudies-literature

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Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113).

Liolios Konstantinos K   Sikorski Johannes J   Lu Meagan M   Nolan Matt M   Lapidus Alla A   Lucas Susan S   Hammon Nancy N   Deshpande Shweta S   Cheng Jan-Fang JF   Tapia Roxanne R   Han Cliff C   Goodwin Lynne L   Pitluck Sam S   Huntemann Marcel M   Ivanova Natalia N   Pagani Ioanna I   Mavromatis Konstantinos K   Ovchinikova Galina G   Pati Amrita A   Chen Amy A   Palaniappan Krishna K   Land Miriam M   Hauser Loren L   Brambilla Evelyne-Marie EM   Kotsyurbenko Oleg O   Rohde Manfred M   Tindall Brian J BJ   Abt Birte B   Göker Markus M   Detter John C JC   Woyke Tanja T   Bristow James J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Klenk Hans-Peter HP   Kyrpides Nikos C NC  

Standards in genomic sciences 20110923 1

Pedobacter saltans Steyn et al. 1998 is one of currently 32 species in the genus Pedobacter within the family Sphingobacteriaceae. The species is of interest for its isolated location in the tree of life. Like other members of the genus P. saltans is heparinolytic. Cells of P. saltans show a peculiar gliding, dancing motility and can be distinguished from other Pedobacter strains by their ability to utilize glycerol and the inability to assimilate D-cellobiose. The genome presented here is only  ...[more]

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