Unknown

Dataset Information

0

Monocyte-specific accessibility of a matrix attachment region in the tumor necrosis factor locus.


ABSTRACT: Regulation of TNF gene expression is cell type- and stimulus-specific. We have previously identified highly conserved noncoding regulatory elements within DNase I-hypersensitive sites (HSS) located 9 kb upstream (HSS-9) and 3 kb downstream (HSS+3) of the TNF gene, which play an important role in the transcriptional regulation of TNF in T cells. They act as enhancers and interact with the TNF promoter and with each other, generating a higher order chromatin structure. Here, we report a novel monocyte-specific AT-rich DNase I-hypersensitive element located 7 kb upstream of the TNF gene (HSS-7), which serves as a matrix attachment region in monocytes. We show that HSS-7 associates with topoisomerase II? (Top2) in vivo and that induction of endogenous TNF mRNA expression is suppressed by etoposide, a Top2 inhibitor. Moreover, Top2 binds to and cleaves HSS-7 in in vitro analysis. Thus, HSS-7, which is selectively accessible in monocytes, can tether the TNF locus to the nuclear matrix via matrix attachment region formation, potentially promoting TNF gene expression by acting as a Top2 substrate.

SUBMITTER: Biglione S 

PROVIDER: S-EPMC3243562 | biostudies-literature | 2011 Dec

REPOSITORIES: biostudies-literature

altmetric image

Publications

Monocyte-specific accessibility of a matrix attachment region in the tumor necrosis factor locus.

Biglione Sebastian S   Tsytsykova Alla V AV   Goldfeld Anne E AE  

The Journal of biological chemistry 20111025 51


Regulation of TNF gene expression is cell type- and stimulus-specific. We have previously identified highly conserved noncoding regulatory elements within DNase I-hypersensitive sites (HSS) located 9 kb upstream (HSS-9) and 3 kb downstream (HSS+3) of the TNF gene, which play an important role in the transcriptional regulation of TNF in T cells. They act as enhancers and interact with the TNF promoter and with each other, generating a higher order chromatin structure. Here, we report a novel mono  ...[more]

Similar Datasets

| S-EPMC7703602 | biostudies-literature
| S-EPMC18835 | biostudies-literature
| S-EPMC4965117 | biostudies-literature
| S-EPMC5449211 | biostudies-literature
| S-EPMC55853 | biostudies-literature
| S-EPMC1976457 | biostudies-literature
| S-EPMC6294625 | biostudies-literature
| S-EPMC3133762 | biostudies-literature
| S-EPMC9783754 | biostudies-literature
| S-EPMC3828356 | biostudies-literature