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IDEAL: Intrinsically Disordered proteins with Extensive Annotations and Literature.


ABSTRACT: IDEAL, Intrinsically Disordered proteins with Extensive Annotations and Literature (http://www.ideal.force.cs.is.nagoya-u.ac.jp/IDEAL/), is a collection of knowledge on experimentally verified intrinsically disordered proteins. IDEAL contains manual annotations by curators on intrinsically disordered regions, interaction regions to other molecules, post-translational modification sites, references and structural domain assignments. In particular, IDEAL explicitly describes protean segments that can be transformed from a disordered state to an ordered state. Since in most cases they can act as molecular recognition elements upon binding of partner proteins, IDEAL provides a data resource for functional regions of intrinsically disordered proteins. The information in IDEAL is provided on a user-friendly graphical view and in a computer-friendly XML format.

SUBMITTER: Fukuchi S 

PROVIDER: S-EPMC3245138 | biostudies-literature | 2012 Jan

REPOSITORIES: biostudies-literature

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IDEAL: Intrinsically Disordered proteins with Extensive Annotations and Literature.

Fukuchi Satoshi S   Sakamoto Shigetaka S   Nobe Yukiko Y   Murakami Seiko D SD   Amemiya Takayuki T   Hosoda Kazuo K   Koike Ryotaro R   Hiroaki Hidekazu H   Ota Motonori M  

Nucleic acids research 20111108 Database issue


IDEAL, Intrinsically Disordered proteins with Extensive Annotations and Literature (http://www.ideal.force.cs.is.nagoya-u.ac.jp/IDEAL/), is a collection of knowledge on experimentally verified intrinsically disordered proteins. IDEAL contains manual annotations by curators on intrinsically disordered regions, interaction regions to other molecules, post-translational modification sites, references and structural domain assignments. In particular, IDEAL explicitly describes protean segments that  ...[more]

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