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Decoding cell lineage from acquired mutations using arbitrary deep sequencing.


ABSTRACT: Because mutations are inevitable, the genome of each cell in a multicellular organism becomes unique and therefore encodes a record of its ancestry. Here we coupled arbitrary single primer PCR with next-generation DNA sequencing to catalog mutations and deconvolve the phylogeny of cultured mouse cells. This study helps pave the way toward construction of retrospective cell-fate maps based on mutations accumulating in genomes of somatic cells.

SUBMITTER: Carlson CA 

PROVIDER: S-EPMC3248619 | biostudies-literature | 2011 Nov

REPOSITORIES: biostudies-literature

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Decoding cell lineage from acquired mutations using arbitrary deep sequencing.

Carlson Cheryl A CA   Kas Arnold A   Kirkwood Robert R   Hays Laura E LE   Preston Bradley D BD   Salipante Stephen J SJ   Horwitz Marshall S MS  

Nature methods 20111127 1


Because mutations are inevitable, the genome of each cell in a multicellular organism becomes unique and therefore encodes a record of its ancestry. Here we coupled arbitrary single primer PCR with next-generation DNA sequencing to catalog mutations and deconvolve the phylogeny of cultured mouse cells. This study helps pave the way toward construction of retrospective cell-fate maps based on mutations accumulating in genomes of somatic cells. ...[more]

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