Factors affecting synonymous codon usage bias in chloroplast genome of oncidium gower ramsey.
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ABSTRACT:
SUBMITTER: Xu C
PROVIDER: S-EPMC3255522 | biostudies-literature | 2011
REPOSITORIES: biostudies-literature
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Factors affecting synonymous codon usage bias in chloroplast genome of oncidium gower ramsey.
Xu Chen C Cai Xiaoning X Chen Quanzhan Q Zhou Hongxia H Cai Yao Y Ben Ailing A
Evolutionary bioinformatics online 20111114
Oncidium Gower Ramsey is a fascinating and important ornamental flower in floral industry. In this research, the complete nucleotide sequence of the chloroplast genome in Oncidium Gower Ramsey was studied, then analyzed using Codonw software. Correspondence analysis and method of effective number of codon as Nc-plot were conducted to analyze synonymous codon usage. According to the corresponding analysis, codon bias in the chloroplast genome of Oncidium Gower Ramsey is related to their gene leng ...[more]
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