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Handling ligands with Coot.


ABSTRACT: Coot is a molecular-graphics application primarily aimed to assist in model building and validation of biological macromolecules. Recently, tools have been added to work with small molecules. The newly incorporated tools for the manipulation and validation of ligands include interaction with PRODRG, subgraph isomorphism-based tools, representation of ligand chemistry, ligand fitting and analysis, and are described here.

SUBMITTER: Debreczeni JE 

PROVIDER: S-EPMC3322601 | biostudies-literature | 2012 Apr

REPOSITORIES: biostudies-literature

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Handling ligands with Coot.

Debreczeni Judit É JÉ   Emsley Paul P  

Acta crystallographica. Section D, Biological crystallography 20120316 Pt 4


Coot is a molecular-graphics application primarily aimed to assist in model building and validation of biological macromolecules. Recently, tools have been added to work with small molecules. The newly incorporated tools for the manipulation and validation of ligands include interaction with PRODRG, subgraph isomorphism-based tools, representation of ligand chemistry, ligand fitting and analysis, and are described here. ...[more]

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