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Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T)).

ABSTRACT: Runella slithyformis Larkin and Williams 1978 is the type species of the genus Runella, which belongs to the Cytophagaceae, a family that was only recently classified to the order Cytophagales in the class Cytophagia. The species is of interest because it is able to grow at temperatures as low as 4°C. This is the first completed genome sequence of a member of the genus Runella and the sixth sequence from the family Cytophagaceae. The 6,919,729 bp long genome consists of a 6.6 Mbp circular genome and five circular plasmids of 38.8 to 107.0 kbp length, harboring a total of 5,974 protein-coding and 51 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

SUBMITTER: Copeland A 

PROVIDER: S-EPMC3387789 | biostudies-literature | 2012 May

REPOSITORIES: biostudies-literature

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Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T)).

Copeland Alex A   Zhang Xiaojing X   Misra Monica M   Lapidus Alla A   Nolan Matt M   Lucas Susan S   Deshpande Shweta S   Cheng Jan-Fang JF   Tapia Roxanne R   Goodwin Lynne A LA   Pitluck Sam S   Liolios Konstantinos K   Pagani Ioanna I   Ivanova Natalia N   Mikhailova Natalia N   Pati Amrita A   Chen Amy A   Palaniappan Krishna K   Land Miriam M   Hauser Loren L   Pan Chongle C   Jeffries Cynthia D CD   Detter John C JC   Brambilla Evelyne-Marie EM   Rohde Manfred M   Djao Olivier D Ngatchou OD   Göker Markus M   Sikorski Johannes J   Tindall Brian J BJ   Woyke Tanja T   Bristow James J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Kyrpides Nikos C NC   Klenk Hans-Peter HP   Mavromatis Konstantinos K  

Standards in genomic sciences 20120504 2

Runella slithyformis Larkin and Williams 1978 is the type species of the genus Runella, which belongs to the Cytophagaceae, a family that was only recently classified to the order Cytophagales in the class Cytophagia. The species is of interest because it is able to grow at temperatures as low as 4°C. This is the first completed genome sequence of a member of the genus Runella and the sixth sequence from the family Cytophagaceae. The 6,919,729 bp long genome consists of a 6.6 Mbp circular genome  ...[more]

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