Unknown

Dataset Information

0

Complete genome sequence of a novel vitivirus isolated from grapevine.

ABSTRACT: A novel virus-like sequence from grapevine was identified by Illumina sequencing. The complete genome is 7,551 nucleotides in length, with polyadenylation at the 3' end. Translation of the sequence revealed five open reading frames (ORFs). The genomic organization was most similar to those of vitiviruses. The polymerase (ORF1) and coat protein (ORF4) genes shared 31 to 49% nucleotide and 40 to 70% amino acid sequence identities, respectively, with other grapevine vitiviruses. The virus was tentatively named grapevine virus F (GVF).

SUBMITTER: Al Rwahnih M 

PROVIDER: S-EPMC3416117 | biostudies-literature | 2012 Sep

REPOSITORIES: biostudies-literature

Json Xml
altmetric image

Publications

Complete genome sequence of a novel vitivirus isolated from grapevine.

Al Rwahnih Maher M   Sudarshana Mysore R MR   Uyemoto Jerry K JK   Rowhani Adib A  

Journal of virology 20120901 17

A novel virus-like sequence from grapevine was identified by Illumina sequencing. The complete genome is 7,551 nucleotides in length, with polyadenylation at the 3' end. Translation of the sequence revealed five open reading frames (ORFs). The genomic organization was most similar to those of vitiviruses. The polymerase (ORF1) and coat protein (ORF4) genes shared 31 to 49% nucleotide and 40 to 70% amino acid sequence identities, respectively, with other grapevine vitiviruses. The virus was tenta  ...[more]

Similar Datasets

Unknown Complete genome sequence of a novel pararetrovirus isolated from soybean.
| S-EPMC3416149 | biostudies-literature
Unknown Complete Genome Sequences of Endophytic Bacilli Isolated from Grapevine Plants.
| S-EPMC6883112 | biostudies-literature
Unknown Complete Genome Sequence of <i>Curtobacterium</i> sp. Strain TXMA1, Isolated from a Grapevine in Texas, USA.
| S-EPMC8759391 | biostudies-literature
Unknown Genome Sequence of Grapevine Virus K, a Novel Vitivirus Infecting Grapevine.
| S-EPMC5597770 | biostudies-literature
Unknown Genome Sequence of Grapevine Virus T, a Novel Foveavirus Infecting Grapevine.
| S-EPMC5597771 | biostudies-literature
Unknown Near-Complete Genome Sequence of Grapevine Fabavirus, a Novel Putative Member of the Genus Fabavirus.
| S-EPMC4956458 | biostudies-literature
Unknown Complete Genome Sequence of a Novel Bastrovirus Isolated from Raw Sewage.
| S-EPMC5629051 | biostudies-literature
Unknown Complete Genome Sequence of a Novel Human Gammapapillomavirus Isolated from Skin.
| S-EPMC5571411 | biostudies-literature
Unknown Complete Genome Sequence of a Novel Human Papillomavirus Isolated from Oral Rinse.
| S-EPMC5679817 | biostudies-literature
Unknown Complete Genome Sequence of a Novel Avian Polyomavirus Isolated from Gouldian Finch.
| S-EPMC4574365 | biostudies-literature