Browse
Submit Data
Databases
API
Help

Dataset Information

21 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft genome sequence of Lactobacillus gigeriorum CRBIP 24.85T, isolated from a chicken crop.

ABSTRACT: We report the draft genome of the strain Lactobacillus gigeriorum CRBIP 24.85(T), isolated from a chicken crop. The total length of the 60 scaffolds is about 1.9 Mb, with a GC content of 38% and 2,062 protein-coding sequences (CDS).

SUBMITTER: Cousin S

PROVIDER: S-EPMC3486101 | biostudies-literature | 2012 Nov

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft genome sequence of Lactobacillus gigeriorum CRBIP 24.85T, isolated from a chicken crop.

Cousin Sylvie S Ma Laurence L Creno Sophie S Clermont Dominique D Loux Valentin V Bizet Chantal C Bouchier Christiane C

Journal of bacteriology 20121101 21

We report the draft genome of the strain Lactobacillus gigeriorum CRBIP 24.85(T), isolated from a chicken crop. The total length of the 60 scaffolds is about 1.9 Mb, with a GC content of 38% and 2,062 protein-coding sequences (CDS). ...[more]

PMID: 23045490

Similar Datasets

Draft Genome Sequence of Lactobacillus salivarius KZ-NCB, Isolated from Chicken Cecum.

Project description:Here, we report the draft genome sequence of Lactobacillus salivarius strain KZ-NCB, which was isolated from the cecum of a healthy chicken from a poultry farm in Kazakhstan.

| S-EPMC7729413 | biostudies-literature

Draft Genome Sequence of Lactobacillus plantarum IYO1511, Isolated from Ishizuchi-Kurocha.

Project description:Lactobacillus plantarum IYO1511, isolated from a traditional postfermented tea, is a predominant species associated with Ishizuchi-kurocha. Here, we report the whole-genome sequence of this bacterium. The draft genome comprises 3,229,083 nucleotides and 3,044 coding DNA sequences (CDSs), with an average G+C content of 44.5%.

| S-EPMC7193925 | biostudies-literature

Draft Genome Sequence of Lactobacillus plantarum wikim18, Isolated from Korean Kimchi.

Project description:This report describes the draft genome sequence of Lactobacillus plantarum strain wikim18, isolated from the traditional Korean food kimchi. The reads generated by Ion Torrent PGM were assembled into 327 contigs. RAST annotation of the genome revealed 12 tRNAs and 3,316 protein-coding gene sequences.

| S-EPMC4031343 | biostudies-literature

Draft Genome Sequence of Lactobacillus plantarum EBKLp545, Isolated from Piglet Feces.

Project description:Lactobacillus plantarum strain EBKLp545 was isolated from piglet feces in South Korea and sequenced using an Illumina HiSeq system. This draft genome of strain EBKLp545 consists of 3,306,513 bp with 3,049 protein-coding genes in 138 contigs (≥500 bp), 54 noncoding RNA genes, and a 44.3% G+C content.

| S-EPMC6473157 | biostudies-literature

Draft Genome Sequence of Lactobacillus plantarum WLPL04, Isolated from Human Breast Milk.

Project description:Lactobacillus plantarum WLPL04, a novel strain, was isolated from a breast milk sample from a healthy woman and demonstrated several probiotic functions. Here, we present the draft genome sequence of this strain, which contains 3,192,587 bp, a G+C content of 44.52%, 3,158 protein-coding genes, and 53 tRNA genes.

| S-EPMC4675948 | biostudies-literature

Draft Genome Sequence of Lactobacillus jensenii UMB0836, Isolated from the Female Bladder.

Project description:Lactobacillus jensenii is a frequent member of both the vaginal and urinary microbiota. Here, we present the draft genome sequence for L. jensenii UMB0836, isolated from catheterized urine obtained from a pregnant female. The genome is 1,648,234 bp long, assembled in 40 contigs.

| S-EPMC7242678 | biostudies-literature

Draft Genome Sequence of Lactobacillus mulieris UMB9245, Isolated from the Female Bladder.

Project description:Lactobacillus jensenii is an anaerobic bacterium found in the urogenital tract that is known to prevent common vaginal infections. Recently, it was divided into two species, L. jensenii and L. mulieris Here, we report the draft genome sequence of L. mulieris UMB9245, with a genome length of 1,723,383 bp assembled into 52 contigs.

| S-EPMC7225554 | biostudies-literature

Draft Genome Sequence of Lactobacillus hominis Strain CRBIP 24.179T, Isolated from Human Intestine.

Project description:We report the draft genome sequence of the strain Lactobacillus hominis CRBIP 24.179(T), isolated from a human clinical sample. The total length of the 28 contigs is about 1.9 Mb, with a G+C content of 37% and 1,983 coding sequences.

| S-EPMC3751617 | biostudies-other

Draft Genome Sequence of Lactobacillus helveticus Lh 23, Isolated from Natural Whey Starter.

Project description:Lactobacillus helveticus is a thermophilic lactic acid bacterium that is widely employed as a starter culture for manufacturing several Swiss and Italian hard-cooked cheeses. The sequencing of L. helveticus Lh 23, which consists of 2,100,230?bp with a GC content of 36.5%, reveals industrially useful traits and interesting metabolic pathways.

| S-EPMC7484063 | biostudies-literature

Draft genome sequence data of Lactobacillus paracasei strain DTA83 isolated from infant stools.

Project description:Here the draft genome sequence of Lactobacillus paracasei strain DTA83, isolated from stools of healthy infants in Rio de Janeiro (Brazil), is reported. The 2.8-Mb genome possesses 2825 protein-coding sequences distributed on 330 SEED subsystems. This strain belongs to a set of potentially probiotic Lactobacillus spp. strains used to study genetic factors related to antibiotic resistance after stress conditions, such as simulated gastrointestinal conditions. The complete genome data have been deposited in GenBank under the accession number QRBH00000000, https://www.ncbi.nlm.nih.gov/nuccore/QRBH00000000.

| S-EPMC6356017 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data