Secondary structure, a missing component of sequence-based minimotif definitions.
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ABSTRACT:
SUBMITTER: Sargeant DP
PROVIDER: S-EPMC3517595 | biostudies-literature | 2012
REPOSITORIES: biostudies-literature
Publications
Secondary structure, a missing component of sequence-based minimotif definitions.
Sargeant David P DP Gryk Michael R MR Maciejewski Mark W MW Thapar Vishal V Kundeti Vamsi V Rajasekaran Sanguthevar S Romero Pedro P Dunker Keith K Li Shun-Cheng SC Kaneko Tomonori T Schiller Martin R MR
PloS one 20121207 12
Minimotifs are short contiguous segments of proteins that have a known biological function. The hundreds of thousands of minimotifs discovered thus far are an important part of the theoretical understanding of the specificity of protein-protein interactions, posttranslational modifications, and signal transduction that occur in cells. However, a longstanding problem is that the different abstractions of the sequence definitions do not accurately capture the specificity, despite decades of effort ...[more]
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