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Genetic diversity and species pattern of Trichoderma and Hypocrea in Manipur using in silico analysis.


ABSTRACT: We investigated the occurrence and genetic diversity of Trichoderma and Hypocrea in Manipur which lies in the Indo-Burma biodiversity hot spot region. 65 Trichoderma isolates were identified at species level by morphological as well as sequence based analysis of the internal transcribed spacer region 1 and 4. Altogether 22 different species of Trichoderma and Hypocrea were found, of which Trichoderma harzianum represent the dominant species. Phylogenetic analysis reveals a clear cut distinction of strains isolated from various collection sites which further hints the need for detail study of Trichoderma on molecular level.

SUBMITTER: Kamala T 

PROVIDER: S-EPMC3563407 | biostudies-literature | 2013

REPOSITORIES: biostudies-literature

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Genetic diversity and species pattern of Trichoderma and Hypocrea in Manipur using in silico analysis.

Kamala Thongram T   Devi Sarangthem Indira SI   Thingnam Gourshyam G   Somkuwar Bharat Gopalrao BG  

Bioinformation 20130118 2


We investigated the occurrence and genetic diversity of Trichoderma and Hypocrea in Manipur which lies in the Indo-Burma biodiversity hot spot region. 65 Trichoderma isolates were identified at species level by morphological as well as sequence based analysis of the internal transcribed spacer region 1 and 4. Altogether 22 different species of Trichoderma and Hypocrea were found, of which Trichoderma harzianum represent the dominant species. Phylogenetic analysis reveals a clear cut distinction  ...[more]

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