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Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282(T)).

ABSTRACT: Gillisia limnaea Van Trappen et al. 2004 is the type species of the genus Gillisia, which is a member of the well characterized family Flavobacteriaceae. The genome of G. limnea R-8282(T) is the first sequenced genome (permanent draft) from a type strain of the genus Gillisia. Here we describe the features of this organism, together with the permanent-draft genome sequence and annotation. The 3,966,857 bp long chromosome (two scaffolds) with its 3,569 protein-coding and 51 RNA genes is a part of the GenomicEncyclopedia of Bacteria and Archaea project.

SUBMITTER: Riedel T 

PROVIDER: S-EPMC3570806 | biostudies-literature | 2012 Oct

REPOSITORIES: biostudies-literature

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Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282(T)).

Riedel Thomas T   Held Brittany B   Nolan Matt M   Lucas Susan S   Lapidus Alla A   Tice Hope H   Del Rio Tijana Glavina TG   Cheng Jan-Fang JF   Han Cliff C   Tapia Roxanne R   Goodwin Lynne A LA   Pitluck Sam S   Liolios Konstantinos K   Mavromatis Konstantinos K   Pagani Ioanna I   Ivanova Natalia N   Mikhailova Natalia N   Pati Amrita A   Chen Amy A   Palaniappan Krishna K   Land Miriam M   Rohde Manfred M   Tindall Brian J BJ   Detter John C JC   Göker Markus M   Bristow James J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Kyrpides Nikos C NC   Klenk Hans-Peter HP   Woyke Tanja T  

Standards in genomic sciences 20121001 1

Gillisia limnaea Van Trappen et al. 2004 is the type species of the genus Gillisia, which is a member of the well characterized family Flavobacteriaceae. The genome of G. limnea R-8282(T) is the first sequenced genome (permanent draft) from a type strain of the genus Gillisia. Here we describe the features of this organism, together with the permanent-draft genome sequence and annotation. The 3,966,857 bp long chromosome (two scaffolds) with its 3,569 protein-coding and 51 RNA genes is a part of  ...[more]

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