Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Catena-Poly[[[diaqua-(1,10-phenanthroline-?(2) N,N')cobalt(II)]-?-1H-benzimidazole-5,6-dicarboxyl-ato-?(2) N (3):O (6)] sesquihydrate}.

ABSTRACT: In the title compound, {[Co(C9H4N2O4)(C12H8N2)(H2O)2]·1.5H2O} n , the Co(II) atom is hexa-coordinated by one N atom and one O atom from two symmetry-related 1H-benzimidazole-5,6-dicarboxyl-ate ligands, two N atoms from one 1,10-phenanthroline ligand (phen) and two water mol-ecules. The dihedral angle between the 1H-benzimidazole-5,6-dicarboxyl-ate and 1,10-phenanthroline ligands is 74.41?(4)°. The crystal packing is governed by inter-molecular O-H?O and N-H?O hydrogen-bonding inter-actions. All water (coordin-ating and lattice) mol-ecules take part in the hydrogen-bonding inter-actions. In addition, there are ?-? stacking inter-actions between inversion-related phen ligands, the shortest centroid-centroid distance being 3.7536?(16)?Å. One of the two lattice water molecules shows half-occupancy.

SUBMITTER: Xu DB

PROVIDER: S-EPMC3588709 | biostudies-literature | 2012 Dec

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Similar Datasets

catena-Poly[[diaqua-(1,10-phenanthroline-?N,N')nickel(II)]-?-1H-benzimidazole-5,6-dicarboxyl-ato-?N:O].

Project description:In the title complex, [Ni(C(9)H(4)N(2)O(4))(C(12)H(8)N(2))(H(2)O)(2)](n), the Ni(II) atom is hexa-coordinated by one N and one O atom from two different 1H-benzimidazole-5,6-dicarboxyl-ate ligands, two N atoms from one 1,10-phenanthroline ligand and two water mol-ecules. The flexible 1H-benzimidazole-5,6-dicarboxyl-ate ligands link the Ni(II) centres, forming an infinite zigzag chain parallel to [001]. The crystal packing is governed by inter-molecular hydrogen-bonding inter-actions of the O-H?O, N-H?O and C-H?O types.

| S-EPMC2969534 | biostudies-literature

catena-Poly[[aqua-(pyrazino[2,3-f][1,10]phenanthroline-?N,N)cobalt(II)]-?-pyrazine-2,3-dicarboxyl-ato-?NO:O].

Project description:In the title compound, [Co(C(6)H(2)N(2)O(4))(C(14)H(8)N(4))(H(2)O)](n), the Co atom is bonded to one N,N'-bidentate pyrazino[2,3-f][1,10]phenanthroline (Pyphen) ligand, one N,O-bidentate pyrazine-2,3-dicarboxyl-ate (PZDC) dianion and one water mol-ecule in a distorted octa-hedral mer-CoN(3)O(3) geometry. The Co(II) atoms are bridged by the PZDC dianions, forming an infinite one-dimensional chain running along the b axis. Adjacent chains pack together through ?-? stacking inter-actions [centroid-centroid separations = 3.498?(4) and 3.528?(4)?Å], and O-H?O and O-H?N hydrogen bonds involving the water mol-ecule complete the structure.

| S-EPMC2960716 | biostudies-literature

Poly[diaqua-(?(3)-1H-benzimidazole-5,6-dicarboxyl-ato-?N:O,O:O)magnesium(II)].

Project description:In the title complex, [Mg(C(9)H(4)N(2)O(4))(H(2)O)(2)](n), the Mg(II) atom is six-coordinated by one N and three O atoms from three different 1H-benzimidazole-5,6-dicarboxyl-ate ligands and two O atoms from two water mol-ecules, forming a slightly distorted octa-hedral geometry. The ligand links the Mg(II) centres into a three-dimensional network. Extensive N-H?O and O-H?O hydrogen bonds exist between the ligands and water mol-ecules, stabilizing the crystal structure.

| S-EPMC2979947 | biostudies-literature

Poly[[aqua-(μ(5)-1H-benzimidazole-5,6-dicarboxyl-ato)(μ(4)-1H-benzimidazole-5,6-dicarboxyl-ato)dibarium] 4.5-hydrate].

Project description:The polymeric title compound, {[Ba(2)(C(9)H(4)N(2)O(4))(2)(H(2)O)]·4.5H(2)O}(n), adopts a layer structure parallel to (001) in which adjacent Ba(II) atoms are connected by two benzimidazole-5,6-dicarboxyl-ate dianions, one functioning in a μ(4)-bridging mode and the other in a μ(5)-bridging mode. The Ba atom having water in its coordination environment as well as the Ba atom without water exist in a nine-coordinate polyhedron of O atoms; the geometry is difficult to derive. Lattice water mol-ecules occupy the space between layers and inter-act with the layers through O-H⋯O, O-H⋯N and N-H⋯O hydrogen bonds. ne of the five lattice water molecules is equally disordered around an inversion centre and shows half-occupancy.

| S-EPMC3120458 | biostudies-literature

catena-Poly[[[diaqua-(1,10-phenanthroline-?(2)N,N')cobalt(II)]-?-4-hy-droxy-3-sulfonato-benzoato-?(2)O(3):O(1)] sesquihydrate].

Project description:The 1,10-phenanthroline-chelated Co(II) atom in the polymeric title compound, {[Co(C(7)H(4)O(6)S)(C(12)H(8)N(2))(H(2)O)(2)]·1.5H(2)O}(n), is connected to the sulfonate O atom of one 4-hy-droxy-3-sulfonato-benzoate dianion and to the carboxyl-ate O atom of another dianion. It is also coordinated by two water mol-ecules in a trans-CoN(2)O(4) octa-hedral environment. The dianion links adjacent metal atoms into a chain running along [110]. The chains are linked by O-H?O hydrogen bonds into a three-dimensional network.

| S-EPMC3379066 | biostudies-literature

catena-Poly[[diaqua-(1H-imidazo[4,5-f][1,10]phenanthroline)cobalt(II)]-μ-sulfato].

Project description:The Co(II) ion in the title complex, [Co(SO(4))(C(13)H(8)N(4))(H(2)O)(2)](n), has a slightly distorted octa-hedral coordination environment formed by two O atoms from two symmetry-related bridging sulfate ligands, two N atoms from a bis-chelating 1H-imidazo[4,5-f][1,10]phenanthroline (IPL) ligand and two O atoms from coordinated water mol-ecules. The bridging sulfate ligands connect Co(II) ions to form a one-dimensional chain along the b-axis direction. In the crystal structure, inter-molecular O-H⋯O, O-H⋯N and N-H⋯O hydrogen bonds link the chains into a three-dimensional network.

| S-EPMC2969714 | biostudies-literature

Poly[[diaqua-(?(4)-1H-benzimidazole-5,6-dicarboxyl-ato)strontium] monohydrate].

Project description:Each of the carboxyl-ate -CO(2) fragments of the dianion ligand in the title compound, {[Sr(C(9)H(4)N(2)O(4))(H(2)O)(2)]·H(2)O}(n), chelates to a Sr(II) atom and at the same time, one of the two O atoms coordinates to a third Sr(II) atom. The ?(4)-bridging mode of the dianion generates a square-grid layer motif; adjacent layers are connected by O-H?O, O-H?N and N-H?O hydrogen bonds, forming a three-dimensional network. The eight-coordinate Sr atom exists in a distorted square-anti-prismatic geometry. The crystal studied was a non-merohedral twin with a minor twin component of 24%.

| S-EPMC2971846 | biostudies-other

Triaqua-(1,10-phenanthroline-2,9-dicarboxyl-ato)cobalt(II) dihydrate.

Project description:The title compound, [Co(C(14)H(6)N(2)O(4))(H(2)O)(3)]·2H(2)O, has two-fold crystallographic symmetry. The Co(II) atom is in a distorted penta-gonal-bipyramidal coordination environment with two N atoms and two O atoms from a tetradentate 1,10-phenanthroline-2,9-dicarboxyl-ate ligand and one O atom from a water mol-ecule forming the penta-gonal plane, and two O atoms from two water mol-ecules occupying axial positions. In the crystal, adjacent mol-ecules are linked by O-H?O hydrogen bonds, forming a three-dimensional network.

| S-EPMC2983888 | biostudies-other

Poly[(?-1H-benzimidazole-5,6-dicarboxyl-ato)lead(II)].

Project description:The crystal structure of the two-dimensional polymeric title compound, [Pb(C(9)H(4)N(2)O(4))](n), comprises one crystallo-graphic-ally independent Pb(II) atom and one fully deprotonated 1H-benzimidazole-5,6-dicarboxyl-ate (H(2)L) ligand. The Pb(II) atom is seven-coordinated by six O atoms and one N atom from the H(2)L ligands, giving a capped octa-hedral coordination geometry. The structure is a layered two-dimensional coordination polymer extending parallel to (100) with N-H?O hydrogen bonds inter-actions between the layers, stabilizing the crystal structure.

| S-EPMC3120506 | biostudies-literature

catena-Poly[[[aqua-(1,10-phenanthroline-?²N,N')zinc]-?-acetyl-ene-dicarboxyl-ato-?²O¹:O²] monohydrate].

Project description:In the title complex, {[Zn(C?O?)(C??H?N?)(H?O)]·H?O}(n), the penta-coordinated Zn(II) ion is bound to two N atoms of the 1,10-phenanthroline ligand, two O atoms from two bridging acetyl-enedicarboxyl-ate anions and a water O atom in a distorted trigonal-bipyramidal geometry. The crystal structure is characterized by polymeric zigzag chains running parallel to [2-10] and is stabilized by O-H?O hydrogen bonds.

| S-EPMC3393169 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data