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New insights into the classification and nomenclature of cortical GABAergic interneurons.


ABSTRACT: A systematic classification and accepted nomenclature of neuron types is much needed but is currently lacking. This article describes a possible taxonomical solution for classifying GABAergic interneurons of the cerebral cortex based on a novel, web-based interactive system that allows experts to classify neurons with pre-determined criteria. Using Bayesian analysis and clustering algorithms on the resulting data, we investigated the suitability of several anatomical terms and neuron names for cortical GABAergic interneurons. Moreover, we show that supervised classification models could automatically categorize interneurons in agreement with experts' assignments. These results demonstrate a practical and objective approach to the naming, characterization and classification of neurons based on community consensus.

SUBMITTER: DeFelipe J 

PROVIDER: S-EPMC3619199 | biostudies-literature | 2013 Mar

REPOSITORIES: biostudies-literature

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New insights into the classification and nomenclature of cortical GABAergic interneurons.

DeFelipe Javier J   López-Cruz Pedro L PL   Benavides-Piccione Ruth R   Bielza Concha C   Larrañaga Pedro P   Anderson Stewart S   Burkhalter Andreas A   Cauli Bruno B   Fairén Alfonso A   Feldmeyer Dirk D   Fishell Gord G   Fitzpatrick David D   Freund Tamás F TF   González-Burgos Guillermo G   Hestrin Shaul S   Hill Sean S   Hof Patrick R PR   Huang Josh J   Jones Edward G EG   Kawaguchi Yasuo Y   Kisvárday Zoltán Z   Kubota Yoshiyuki Y   Lewis David A DA   Marín Oscar O   Markram Henry H   McBain Chris J CJ   Meyer Hanno S HS   Monyer Hannah H   Nelson Sacha B SB   Rockland Kathleen K   Rossier Jean J   Rubenstein John L R JL   Rudy Bernardo B   Scanziani Massimo M   Shepherd Gordon M GM   Sherwood Chet C CC   Staiger Jochen F JF   Tamás Gábor G   Thomson Alex A   Wang Yun Y   Yuste Rafael R   Ascoli Giorgio A GA  

Nature reviews. Neuroscience 20130206 3


A systematic classification and accepted nomenclature of neuron types is much needed but is currently lacking. This article describes a possible taxonomical solution for classifying GABAergic interneurons of the cerebral cortex based on a novel, web-based interactive system that allows experts to classify neurons with pre-determined criteria. Using Bayesian analysis and clustering algorithms on the resulting data, we investigated the suitability of several anatomical terms and neuron names for c  ...[more]

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